RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17590.1 View Network Show in Genome Browser |
| Other Names | Os03g0284500 |
| Description | cat eye syndrome critical region protein 5 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9783786-9788821 Nucleotide Length: 1170 |
| Protein-coding | LOC_Os03g17590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27730 LOC_Os02g58139 LOC_Os03g03360 LOC_Os03g16670 LOC_Os02g57100 LOC_Os01g63980 LOC_Os02g07730 LOC_Os01g01120 LOC_Os03g17310 LOC_Os01g74152 LOC_Os02g07630 More.. |
| Downstream Genes | LOC_Os11g40500 LOC_Os04g08340 LOC_Os05g23260 LOC_Os08g41730 LOC_Os06g16260 LOC_Os09g32800 LOC_Os09g13680 LOC_Os06g40960 LOC_Os09g08660 LOC_Os06g45440 LOC_Os08g39390 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17590.1 |
| Rice Genome Annotation | LOC_Os03g17590.1 |
| Ricechip | LOC_Os03g17590.1 |
| KEGG | osa:4332467 dosa:Os03t0284500-01 |
| Entrez-Gene | 4332467 |