RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17700.1 View Network Show in Genome Browser |
| Other Names | Os03g0285800 |
| Description | CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9847700-9850473 Nucleotide Length: 1110 |
| Protein-coding | LOC_Os03g17700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32660 LOC_Os02g15810 LOC_Os01g69920 LOC_Os01g38670 LOC_Os01g74000 LOC_Os02g05630 LOC_Os02g08364 LOC_Os01g38680 LOC_Os02g48840 LOC_Os03g16130 LOC_Os01g40570 More.. |
| Downstream Genes | LOC_Os12g07590 LOC_Os05g26890 LOC_Os06g06090 LOC_Os06g05520 LOC_Os03g39710 LOC_Os06g20340 LOC_Os06g27890 LOC_Os03g46650 LOC_Os03g54780 LOC_Os05g45420 LOC_Os05g32600 More.. |
| Reference | |
|---|---|
| PubMed | 21081102 12615946 16673940 22020099 22437844 21487048 12177502 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17700.1 |
| Rice Genome Annotation | LOC_Os03g17700.1 |
| Ricechip | LOC_Os03g17700.1 |
| KEGG | osa:4332475 dosa:Os03t0285800-01 |
| Entrez-Gene | 4332475 |