RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17710.2 View Network Show in Genome Browser |
| Other Names | Os03g0285900 |
| Description | splicing factor, arginine/serine-rich, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9852712-9856043 Nucleotide Length: 993 |
| Protein-coding | LOC_Os03g17710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05310 LOC_Os01g27940 LOC_Os02g12850 LOC_Os02g58090 LOC_Os02g13990 LOC_Os02g37430 LOC_Os02g39010 LOC_Os02g52140 LOC_Os02g14780 LOC_Os01g72890 LOC_Os01g43170 More.. |
| Downstream Genes | LOC_Os08g37960 LOC_Os06g45910 LOC_Os06g45900 LOC_Os04g39444 LOC_Os10g06130 LOC_Os07g47630 LOC_Os03g50850 LOC_Os04g41100 LOC_Os05g43450 LOC_Os06g30020 LOC_Os03g25980 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17710.2 |
| Rice Genome Annotation | LOC_Os03g17710.2 |
| Ricechip | LOC_Os03g17710.2 |
| KEGG | osa:4332476 dosa:Os03t0285900-01 |
| Entrez-Gene | 4332476 |