RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17790.1 View Network Show in Genome Browser |
| Other Names | Os03g0286900 |
| Description | OsRCI2-5 - Putative low temperature and salt responsive protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9899758-9900400 Nucleotide Length: 165 |
| Protein-coding | LOC_Os03g17790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51380 LOC_Os01g57570 LOC_Os02g58510 LOC_Os02g38920 LOC_Os01g73310 LOC_Os02g07830 LOC_Os02g57590 LOC_Os02g42860 LOC_Os01g37800 LOC_Os02g14860 LOC_Os02g12740 More.. |
| Downstream Genes | LOC_Os12g03090 LOC_Os11g03400 LOC_Os06g37180 LOC_Os04g55960 LOC_Os05g32630 LOC_Os08g02340 LOC_Os08g04460 LOC_Os10g36180 LOC_Os07g08330 LOC_Os05g42190 LOC_Os05g01600 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17790.1 |
| Rice Genome Annotation | LOC_Os03g17790.1 |
| Ricechip | LOC_Os03g17790.1 |
| KEGG | osa:4332481 dosa:Os03t0286900-01 |
| Entrez-Gene | 4332481 |