RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17920.1 View Network Show in Genome Browser |
| Other Names | Os03g0288500 |
| Description | RNA pseudouridine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9981239-9986561 Nucleotide Length: 945 |
| Protein-coding | LOC_Os03g17920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05806 |
| Downstream Genes | LOC_Os07g46600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17920.1 |
| Rice Genome Annotation | LOC_Os03g17920.1 |
| Ricechip | LOC_Os03g17920.1 |
| KEGG | osa:4332490 dosa:Os03t0288500-01 |
| Entrez-Gene | 4332490 |