RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g17940.1 View Network Show in Genome Browser |
| Other Names | Os03g0288700 |
| Description | phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 9990512-9993307 Nucleotide Length: 675 |
| Protein-coding | LOC_Os03g17940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04660 LOC_Os01g49820 LOC_Os01g67560 LOC_Os01g47580 LOC_Os02g44290 LOC_Os01g16240 LOC_Os01g17190 LOC_Os02g32660 LOC_Os02g55880 LOC_Os01g59530 |
| Downstream Genes | LOC_Os08g27040 LOC_Os03g59070 LOC_Os05g47660 LOC_Os08g27030 LOC_Os09g13870 LOC_Os08g03370 LOC_Os05g45770 LOC_Os07g48780 LOC_Os05g41210 LOC_Os03g20370 LOC_Os12g03816 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g17940.1 |
| Rice Genome Annotation | LOC_Os03g17940.1 |
| Ricechip | LOC_Os03g17940.1 |
| KEGG | osa:4332492 dosa:Os03t0288700-01 |
| Entrez-Gene | 4332492 |