RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18080.1 View Network Show in Genome Browser |
| Other Names | Os03g0290500 |
| Description | SacI homology domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10090149-10097873 Nucleotide Length: 1803 |
| Protein-coding | LOC_Os03g18080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08780 LOC_Os03g04120 LOC_Os01g50616 LOC_Os01g51890 LOC_Os02g04020 LOC_Os02g48740 LOC_Os01g33080 LOC_Os02g50350 LOC_Os02g11830 LOC_Os02g48990 LOC_Os02g33450 More.. |
| Downstream Genes | LOC_Os08g01750 LOC_Os05g46720 LOC_Os06g14530 LOC_Os11g10420 LOC_Os03g50880 LOC_Os05g08810 LOC_Os09g04110 LOC_Os08g25310 LOC_Os05g45900 LOC_Os03g50340 LOC_Os03g50350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18080.1 |
| Rice Genome Annotation | LOC_Os03g18080.1 |
| Ricechip | LOC_Os03g18080.1 |
| KEGG | osa:4332501 dosa:Os03t0290500-01 |
| Entrez-Gene | 4332501 |