RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18210.1 View Network Show in Genome Browser |
| Other Names | Os03g0293400 |
| Description | basic helix-loop-helix, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10212391-10215769 Nucleotide Length: 2298 |
| Protein-coding | LOC_Os03g18210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g20930 |
| Downstream Genes | LOC_Os12g02730 LOC_Os11g18990 LOC_Os06g45660 LOC_Os03g20630 LOC_Os07g23110 LOC_Os03g53000 LOC_Os04g45280 LOC_Os11g02760 LOC_Os08g41480 LOC_Os09g37700 LOC_Os03g62580 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18210.1 |
| Rice Genome Annotation | LOC_Os03g18210.1 |
| Ricechip | LOC_Os03g18210.1 |
| KEGG | osa:4332518 dosa:Os03t0293400-01 |
| Entrez-Gene | 4332518 |