RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18454.1 View Network Show in Genome Browser |
| Other Names | Os03g0295800 |
| Description | gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10354623-10359349 Nucleotide Length: 798 |
| Protein-coding | LOC_Os03g18454 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73980 LOC_Os02g48740 LOC_Os01g33080 LOC_Os02g11830 LOC_Os03g04750 LOC_Os02g57854 LOC_Os02g05330 LOC_Os01g64660 LOC_Os01g37910 LOC_Os01g57066 LOC_Os02g37580 More.. |
| Downstream Genes | LOC_Os04g57490 LOC_Os08g18044 LOC_Os05g01810 LOC_Os11g32240 LOC_Os10g32820 LOC_Os04g57440 LOC_Os05g24550 LOC_Os06g48750 LOC_Os06g05180 LOC_Os05g02530 LOC_Os08g06250 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18454.1 |
| Rice Genome Annotation | LOC_Os03g18454.1 |
| Ricechip | LOC_Os03g18454.1 |
| KEGG | osa:4332535 dosa:Os03t0295800-01 |
| Entrez-Gene | 4332535 |