RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18720.2 View Network Show in Genome Browser |
| Other Names | Os03g0298800 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10478135-10482626 Nucleotide Length: 696 |
| Protein-coding | LOC_Os03g18720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17010 LOC_Os02g13990 LOC_Os02g03440 LOC_Os02g37430 LOC_Os02g39720 LOC_Os02g02510 LOC_Os01g72890 LOC_Os02g12570 LOC_Os01g43170 LOC_Os02g58090 LOC_Os03g13800 More.. |
| Downstream Genes | LOC_Os03g59710 LOC_Os11g43620 LOC_Os12g18880 LOC_Os07g07220 LOC_Os03g63590 LOC_Os08g05530 LOC_Os08g37960 LOC_Os03g38960 LOC_Os04g39444 LOC_Os07g47630 LOC_Os10g06130 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18720.2 |
| Rice Genome Annotation | LOC_Os03g18720.2 |
| Ricechip | LOC_Os03g18720.2 |
| KEGG | osa:4332557 dosa:Os03t0298800-01 |
| Entrez-Gene | 4332557 |