RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18840.1 View Network Show in Genome Browser |
| Other Names | Os03g0300300 |
| Description | NUC189 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10556232-10561845 Nucleotide Length: 1914 |
| Protein-coding | LOC_Os03g18840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72780 LOC_Os02g37870 LOC_Os01g25610 LOC_Os02g47760 LOC_Os02g57590 LOC_Os02g42550 LOC_Os01g40250 LOC_Os01g49290 LOC_Os01g45530 LOC_Os03g01760 LOC_Os02g01560 More.. |
| Downstream Genes | LOC_Os04g36890 LOC_Os08g09350 LOC_Os03g22880 LOC_Os03g61560 LOC_Os03g21530 LOC_Os08g10649 LOC_Os07g47420 LOC_Os04g52960 LOC_Os04g28060 LOC_Os12g19590 LOC_Os03g50120 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18840.1 |
| Rice Genome Annotation | LOC_Os03g18840.1 |
| Ricechip | LOC_Os03g18840.1 |
| KEGG | osa:4332567 dosa:Os03t0300300-01 |
| Entrez-Gene | 4332567 |