RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18910.1 View Network Show in Genome Browser |
| Other Names | Os03g0301200 |
| Description | COBRA-like protein 7 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10598952-10601530 Nucleotide Length: 2016 |
| Protein-coding | LOC_Os03g18910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g33680 LOC_Os01g47760 LOC_Os02g34560 |
| Downstream Genes | LOC_Os05g48930 LOC_Os04g34140 LOC_Os07g48610 LOC_Os07g40930 LOC_Os09g37080 LOC_Os12g39300 LOC_Os03g55240 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5529 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18910.1 |
| Rice Genome Annotation | LOC_Os03g18910.1 |
| Ricechip | LOC_Os03g18910.1 |
| KEGG | osa:4332574 dosa:Os03t0301200-01 |
| Entrez-Gene | 4332574 |