RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g18940.1 View Network Show in Genome Browser |
| Other Names | Os03g0301400 |
| Description | exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10606874-10612264 Nucleotide Length: 942 |
| Protein-coding | LOC_Os03g18940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g26660 LOC_Os01g17279 LOC_Os01g43080 LOC_Os02g53680 LOC_Os02g55410 LOC_Os03g08640 LOC_Os03g02680 LOC_Os01g63710 LOC_Os01g36390 LOC_Os03g01850 LOC_Os01g49010 More.. |
| Downstream Genes | LOC_Os11g08330 LOC_Os08g28980 LOC_Os12g08740 LOC_Os12g37400 LOC_Os04g23830 LOC_Os11g32290 LOC_Os06g50910 LOC_Os03g22450 LOC_Os05g14590 LOC_Os07g43540 LOC_Os05g38850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g18940.1 |
| Rice Genome Annotation | LOC_Os03g18940.1 |
| Ricechip | LOC_Os03g18940.1 |
| KEGG | osa:4332575 dosa:Os03t0301400-01 |
| Entrez-Gene | 4332575 |