RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19059.1 View Network Show in Genome Browser |
| Other Names | Os03g0302700 |
| Description | anaphase-promoting complex subunit 11, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10672583-10674058 Nucleotide Length: 255 |
| Protein-coding | LOC_Os03g19059 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08280 LOC_Os02g04100 LOC_Os03g18690 LOC_Os03g13170 LOC_Os01g59600 LOC_Os02g21970 LOC_Os02g53060 LOC_Os01g16190 LOC_Os02g03060 LOC_Os02g54490 LOC_Os02g10640 More.. |
| Downstream Genes | LOC_Os05g50360 LOC_Os06g41750 LOC_Os04g40830 LOC_Os07g49150 LOC_Os03g63430 LOC_Os05g09490 LOC_Os05g32600 LOC_Os09g32800 LOC_Os08g12820 LOC_Os11g28350 LOC_Os09g39500 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1431 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19059.1 |
| Rice Genome Annotation | LOC_Os03g19059.1 |
| Ricechip | LOC_Os03g19059.1 |
| KEGG | osa:4332583 dosa:Os03t0302700-01 |
| Entrez-Gene | 4332583 |