RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19240.1 View Network Show in Genome Browser |
| Other Names | Os03g0305000 |
| Description | AMP-binding enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10816007-10820325 Nucleotide Length: 1704 |
| Protein-coding | LOC_Os03g19240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g32670 LOC_Os10g29470 LOC_Os04g52280 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00710 rn01100 rn01110 rn01120 |
| Metacyc Pathways | P124-PWY ANAEROFRUCAT-PWY GLUCONEO-PWY PWY-1042 CALVIN-PWY PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19240.1 |
| Rice Genome Annotation | LOC_Os03g19240.1 |
| Ricechip | LOC_Os03g19240.1 |
| KEGG | osa:4332592 dosa:Os03t0305000-01 |
| Entrez-Gene | 4332592 |