RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19280.1 View Network Show in Genome Browser |
| Other Names | Os03g0305500 |
| Description | argininosuccinate lyase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10843228-10847661 Nucleotide Length: 1560 |
| Protein-coding | LOC_Os03g19280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24354 LOC_Os02g47590 LOC_Os02g13640 LOC_Os01g61814 LOC_Os01g59990 LOC_Os02g41590 LOC_Os02g13530 LOC_Os01g60790 LOC_Os02g07230 LOC_Os02g14059 LOC_Os02g37862 More.. |
| Downstream Genes | LOC_Os12g13320 LOC_Os03g21950 LOC_Os04g46930 LOC_Os11g19770 LOC_Os03g19930 LOC_Os06g35540 LOC_Os04g23820 LOC_Os06g09630 LOC_Os04g35060 LOC_Os07g42450 LOC_Os08g39500 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00250 rn00330 rn01100 rn01110 rn00230 |
| Metacyc Pathways | PWY-4983 ARGSYNBSUB-PWY PWY-4984 ARGININE-SYN4-PWY ARGSYN-PWY PWY-5 DENOVOPURINE2-PWY PWY-841 P121-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19280.1 |
| Rice Genome Annotation | LOC_Os03g19280.1 |
| Ricechip | LOC_Os03g19280.1 |
| KEGG | osa:4332596 dosa:Os03t0305500-01 |
| Entrez-Gene | 4332596 |