RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19340.1 View Network Show in Genome Browser |
| Other Names | Os03g0306302,Os03g0306200 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10866498-10883045 Nucleotide Length: 4881 |
| Protein-coding | LOC_Os03g19340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02290 LOC_Os02g15220 LOC_Os02g44510 LOC_Os02g10320 LOC_Os02g38980 LOC_Os01g16960 LOC_Os01g64490 LOC_Os03g17780 LOC_Os02g53140 LOC_Os01g28680 |
| Downstream Genes | LOC_Os09g37760 LOC_Os08g01794 LOC_Os08g39980 LOC_Os09g33980 LOC_Os10g28040 LOC_Os08g09340 LOC_Os06g43790 LOC_Os04g58110 LOC_Os03g20880 LOC_Os07g32420 LOC_Os08g03360 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5534b |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19340.1 |
| Rice Genome Annotation | LOC_Os03g19340.1 |
| Ricechip | LOC_Os03g19340.1 |
| KEGG | osa:9272235 dosa:Os03t0306302-00dosa:Os03t0306200-01 |
| Entrez-Gene | 4348901 |