RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19380.1 View Network Show in Genome Browser |
| Other Names | Os03g0306800 |
| Description | calvin cycle protein CP12, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10910540-10911544 Nucleotide Length: 396 |
| Protein-coding | LOC_Os03g19380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47020 LOC_Os01g31690 LOC_Os01g56680 |
| Downstream Genes | LOC_Os04g38600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19380.1 |
| Rice Genome Annotation | LOC_Os03g19380.1 |
| Ricechip | LOC_Os03g19380.1 |
| KEGG | osa:4332603 dosa:Os03t0306800-01 |
| Entrez-Gene | 4332603 |