RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19420.2 View Network Show in Genome Browser |
| Other Names | Os03g0307200 |
| Description | nicotianamine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 10926469-10927950 Nucleotide Length: 981 |
| Protein-coding | LOC_Os03g19420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46720 LOC_Os01g65110 LOC_Os02g36880 LOC_Os01g72370 LOC_Os01g72360 LOC_Os01g53020 LOC_Os01g65100 LOC_Os01g37460 LOC_Os02g10350 LOC_Os01g62980 LOC_Os03g02190 More.. |
| Downstream Genes | LOC_Os12g18410 LOC_Os03g19427 LOC_Os03g54000 LOC_Os07g15460 LOC_Os03g32499 LOC_Os05g31670 LOC_Os05g47780 LOC_Os09g04384 LOC_Os12g38270 LOC_Os05g28210 LOC_Os11g15624 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5912 PWY-5957 |
| Reference | |
|---|---|
| PubMed | 22228185 14617093 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19420.2 |
| Rice Genome Annotation | LOC_Os03g19420.2 |
| Ricechip | LOC_Os03g19420.2 |
| KEGG | osa:4332607 dosa:Os03t0307200-01 |
| Entrez-Gene | 4332607 |