RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19650.4 View Network Show in Genome Browser |
| Other Names | Os03g0309800 |
| Description | PPR2, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11048488-11053465 Nucleotide Length: 1332 |
| Protein-coding | LOC_Os03g19650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72800 LOC_Os02g02390 |
| Downstream Genes | LOC_Os03g59640 LOC_Os03g34040 LOC_Os08g34220 LOC_Os03g25390 LOC_Os03g48040 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2093-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19650.4 |
| Rice Genome Annotation | LOC_Os03g19650.4 |
| Ricechip | LOC_Os03g19650.4 |
| KEGG | osa:4332626 dosa:Os03t0309800-01 |
| Entrez-Gene | 4332626 |