RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19680.1 View Network Show in Genome Browser |
| Other Names | Os03g0310400 |
| Description | enoyl-CoA hydratase/isomerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11068942-11071434 Nucleotide Length: 939 |
| Protein-coding | LOC_Os03g19680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50820 LOC_Os01g48690 LOC_Os01g74520 LOC_Os02g56200 LOC_Os02g57160 LOC_Os01g69850 LOC_Os01g57910 LOC_Os01g16430 |
| Downstream Genes | LOC_Os05g45300 LOC_Os06g43610 LOC_Os08g05640 LOC_Os07g27480 LOC_Os08g21330 LOC_Os04g56510 LOC_Os07g37180 LOC_Os12g03470 LOC_Os07g12530 LOC_Os11g34750 LOC_Os04g54790 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00640 rn00720 rn01100 rn01120 rn00071 rn00310 rn00362 rn00380 rn00627 rn00650 rn00280 rn01110 rn00062 rn00360 rn00930 rn00281 rn00903 rn00592 |
| Metacyc Pathways | P3-PWY P127-PWY CENTFERM-PWY PWY-5177 PWY-5138 PWY-5080 PWY-5136 FAO-PWY PWY-3941 VALDEG-PWY ILEUDEG-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19680.1 |
| Rice Genome Annotation | LOC_Os03g19680.1 |
| Ricechip | LOC_Os03g19680.1 |
| KEGG | osa:4332628 dosa:Os03t0310400-01 |
| Entrez-Gene | 4332628 |