RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19780.1 View Network Show in Genome Browser |
| Other Names | Os03g0311600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11133135-11134225 Nucleotide Length: 618 |
| Protein-coding | LOC_Os03g19780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g06510 LOC_Os01g40700 LOC_Os02g53200 LOC_Os01g49250 LOC_Os01g55190 LOC_Os03g18430 LOC_Os01g11550 LOC_Os02g49950 LOC_Os01g44110 |
| Downstream Genes | LOC_Os03g61080 LOC_Os04g44780 LOC_Os12g44340 LOC_Os03g47140 LOC_Os09g28520 LOC_Os12g29580 LOC_Os03g49610 LOC_Os09g37910 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19780.1 |
| Rice Genome Annotation | LOC_Os03g19780.1 |
| Ricechip | LOC_Os03g19780.1 |
| KEGG | osa:4332635 dosa:Os03t0311600-01 |
| Entrez-Gene | 4332635 |