RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g19870.2 View Network Show in Genome Browser |
| Other Names | Os03g0312600 |
| Description | ATP binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11171645-11178007 Nucleotide Length: 1191 |
| Protein-coding | LOC_Os03g19870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g34950 LOC_Os02g14929 LOC_Os02g51410 LOC_Os03g13860 LOC_Os02g06340 LOC_Os01g01302 LOC_Os02g54340 LOC_Os01g64640 LOC_Os01g08960 LOC_Os01g37800 LOC_Os02g38200 More.. |
| Downstream Genes | LOC_Os03g50620 LOC_Os03g21914 LOC_Os12g07720 LOC_Os03g31500 LOC_Os06g34690 LOC_Os08g25060 LOC_Os08g01770 LOC_Os04g54800 LOC_Os07g22950 LOC_Os03g29470 LOC_Os06g12150 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g19870.2 |
| Rice Genome Annotation | LOC_Os03g19870.2 |
| Ricechip | LOC_Os03g19870.2 |
| KEGG | osa:4332638 dosa:Os03t0312600-01 |
| Entrez-Gene | 4332638 |