RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g20010.2 View Network Show in Genome Browser |
| Other Names | Os03g0314700 |
| Description | nifU, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11271837-11273210 Nucleotide Length: 522 |
| Protein-coding | LOC_Os03g20010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54020 LOC_Os03g14370 |
| Downstream Genes | LOC_Os08g05490 LOC_Os12g05650 LOC_Os03g51990 LOC_Os08g23110 LOC_Os08g42100 LOC_Os04g32110 LOC_Os03g29980 LOC_Os03g40100 LOC_Os08g42080 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g20010.2 |
| Rice Genome Annotation | LOC_Os03g20010.2 |
| Ricechip | LOC_Os03g20010.2 |
| KEGG | osa:4332649 dosa:Os03t0314700-01 |
| Entrez-Gene | 4332649 |