RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g20100.1 View Network Show in Genome Browser |
| Other Names | Os03g0315800 |
| Description | S1 RNA binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11351431-11355773 Nucleotide Length: 1209 |
| Protein-coding | LOC_Os03g20100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04460 LOC_Os01g48690 LOC_Os01g72800 LOC_Os03g12020 LOC_Os03g15870 LOC_Os01g54540 LOC_Os01g59060 LOC_Os03g03360 LOC_Os02g15900 LOC_Os02g19860 LOC_Os03g18510 More.. |
| Downstream Genes | LOC_Os03g60100 LOC_Os03g62630 LOC_Os03g61260 LOC_Os08g44290 LOC_Os03g54040 LOC_Os06g22690 LOC_Os06g45370 LOC_Os03g34040 LOC_Os04g43922 LOC_Os06g04280 LOC_Os06g46930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g20100.1 |
| Rice Genome Annotation | LOC_Os03g20100.1 |
| Ricechip | LOC_Os03g20100.1 |
| KEGG | osa:4332652 dosa:Os03t0315800-01 |
| Entrez-Gene | 4332652 |