RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g20370.1 View Network Show in Genome Browser |
| Other Names | Os03g0319300 |
| Description | OsCam1-1 - Calmodulin, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11522674-11524473 Nucleotide Length: 450 |
| Protein-coding | LOC_Os03g20370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02750 LOC_Os02g55880 LOC_Os02g10740 LOC_Os02g57190 LOC_Os01g62570 LOC_Os02g36974 LOC_Os02g52940 LOC_Os03g18010 LOC_Os02g38340 LOC_Os01g73310 LOC_Os01g71990 More.. |
| Downstream Genes | LOC_Os03g48140 LOC_Os06g29350 LOC_Os03g53660 LOC_Os12g37560 LOC_Os06g51250 LOC_Os03g59590 LOC_Os08g25010 LOC_Os08g44390 LOC_Os06g40200 LOC_Os08g27850 LOC_Os12g12860 More.. |
| Reference | |
|---|---|
| PubMed | 17263873 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g20370.1 |
| Rice Genome Annotation | LOC_Os03g20370.1 |
| Ricechip | LOC_Os03g20370.1 |
| KEGG | osa:4332664 dosa:Os03t0319300-01 |
| Entrez-Gene | 4332664 |