RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g20500.1 View Network Show in Genome Browser |
| Other Names | Os03g0321300 |
| Description | OsFBX82 - F-box domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11613231-11614909 Nucleotide Length: 1155 |
| Protein-coding | LOC_Os03g20500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11710 LOC_Os02g16500 LOC_Os03g02240 LOC_Os01g59150 LOC_Os02g43660 LOC_Os03g08790 LOC_Os02g49950 LOC_Os02g09740 LOC_Os02g53520 LOC_Os01g29150 LOC_Os01g50010 More.. |
| Downstream Genes | LOC_Os10g22590 LOC_Os05g02820 LOC_Os05g04820 LOC_Os06g06250 LOC_Os10g37240 LOC_Os04g42620 LOC_Os03g45920 LOC_Os07g38590 LOC_Os07g48370 LOC_Os12g40890 LOC_Os05g45930 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR812n-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g20500.1 |
| Rice Genome Annotation | LOC_Os03g20500.1 |
| Ricechip | LOC_Os03g20500.1 |
| KEGG | osa:4332677 dosa:Os03t0321300-01 |
| Entrez-Gene | 4332677 |