RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g20570.1 View Network Show in Genome Browser |
| Other Names | Os03g0321900 |
| Description | tRNA-specific adenosine deaminase 2, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11653999-11656617 Nucleotide Length: 552 |
| Protein-coding | LOC_Os03g20570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55974 LOC_Os03g02600 LOC_Os01g52790 LOC_Os01g11300 LOC_Os01g51540 LOC_Os02g27340 LOC_Os01g11340 LOC_Os01g11270 LOC_Os01g11280 LOC_Os02g30840 LOC_Os01g43710 More.. |
| Downstream Genes | LOC_Os09g04210 LOC_Os11g32240 LOC_Os05g30890 LOC_Os04g58690 LOC_Os08g06070 LOC_Os05g12040 LOC_Os05g34380 LOC_Os07g28160 LOC_Os07g44140 LOC_Os12g07720 LOC_Os07g23570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g20570.1 |
| Rice Genome Annotation | LOC_Os03g20570.1 |
| Ricechip | LOC_Os03g20570.1 |
| KEGG | osa:4332682 dosa:Os03t0321900-02 |
| Entrez-Gene | 4332682 |