RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g20630.1 View Network Show in Genome Browser |
| Other Names | Os03g0322500 |
| Description | histidine triad family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11672780-11677517 Nucleotide Length: 471 |
| Protein-coding | LOC_Os03g20630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18210 LOC_Os01g37850 LOC_Os02g44510 LOC_Os01g73140 LOC_Os03g15120 LOC_Os01g61550 LOC_Os02g42320 LOC_Os01g47340 |
| Downstream Genes | LOC_Os12g02730 LOC_Os04g48380 LOC_Os11g02760 LOC_Os11g38780 LOC_Os05g49740 LOC_Os04g52710 LOC_Os03g54230 LOC_Os05g33260 LOC_Os07g32900 LOC_Os08g41250 LOC_Os07g42960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g20630.1 |
| Rice Genome Annotation | LOC_Os03g20630.1 |
| Ricechip | LOC_Os03g20630.1 |
| KEGG | osa:4332685 dosa:Os03t0322500-01 |
| Entrez-Gene | 4332685 |