RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g20720.1 View Network Show in Genome Browser |
| Other Names | Os03g0323500 |
| Description | GTPase-activating protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 11724995-11731577 Nucleotide Length: 1998 |
| Protein-coding | LOC_Os03g20720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42134 LOC_Os01g47780 LOC_Os01g16030 LOC_Os01g04710 LOC_Os03g02240 |
| Downstream Genes | LOC_Os11g30560 LOC_Os07g01370 LOC_Os06g11990 LOC_Os03g63710 LOC_Os08g13350 LOC_Os10g42420 LOC_Os09g37910 LOC_Os05g32270 LOC_Os06g08730 LOC_Os09g33740 LOC_Os04g40730 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g20720.1 |
| Rice Genome Annotation | LOC_Os03g20720.1 |
| Ricechip | LOC_Os03g20720.1 |
| KEGG | osa:4332692 dosa:Os03t0323500-01 |
| Entrez-Gene | 4332692 |