RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g21080.1 View Network Show in Genome Browser
Other Names	Os03g0328000
Description	guanine nucleotide exchange factor, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 12001288-12007841 Nucleotide Length: 2901
Protein-coding	LOC_Os03g21080

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0030234	enzyme regulator activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g20850 LOC_Os02g58730 LOC_Os02g43130 LOC_Os02g43050 LOC_Os02g02840 LOC_Os01g68324 LOC_Os02g50860 LOC_Os01g29230 LOC_Os03g02150 LOC_Os01g54040 LOC_Os02g58490 More..
Downstream Genes	LOC_Os03g21620 LOC_Os07g48290 LOC_Os03g22880 LOC_Os05g51180 LOC_Os05g10740 LOC_Os10g39910 LOC_Os11g32900 LOC_Os06g12790 LOC_Os05g43820 LOC_Os03g51020 LOC_Os12g18110 More..

Pathways
KEGG Pathways	rn00290 rn00660 rn01100 rn01110 rn01210
Metacyc Pathways	ILEUSYN-PWY VALSYN-PWY

Database Links
Gramene	LOC_Os03g21080.1
Rice Genome Annotation	LOC_Os03g21080.1
Ricechip	LOC_Os03g21080.1
KEGG	osa:4332718 dosa:Os03t0328000-01
Entrez-Gene	4332718