RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g21250.1 View Network Show in Genome Browser |
| Other Names | Os03g0330000 |
| Description | glycosyl transferase, family 8, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12133469-12138706 Nucleotide Length: 1896 |
| Protein-coding | LOC_Os03g21250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41520 LOC_Os01g65780 LOC_Os03g20120 LOC_Os03g08600 LOC_Os02g20850 LOC_Os01g42850 LOC_Os02g35020 LOC_Os02g58730 LOC_Os02g02840 LOC_Os02g30840 LOC_Os03g16980 More.. |
| Downstream Genes | LOC_Os07g48830 LOC_Os04g43700 LOC_Os05g35200 LOC_Os05g26890 LOC_Os06g12790 LOC_Os05g43820 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395v osa-miR395t osa-miR395o osa-miR395x |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn00520 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g21250.1 |
| Rice Genome Annotation | LOC_Os03g21250.1 |
| Ricechip | LOC_Os03g21250.1 |
| KEGG | osa:4332727 dosa:Os03t0330000-01 |
| Entrez-Gene | 4332727 |