RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g21260.1 View Network Show in Genome Browser
Other Names	Os03g0330200
Description	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 12145869-12150203 Nucleotide Length: 1677
Protein-coding	LOC_Os03g21260

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005739	mitochondrion	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g57060 LOC_Os01g47450 LOC_Os02g40500 LOC_Os01g62420 LOC_Os03g14450 LOC_Os02g43180 LOC_Os01g27140 LOC_Os02g07260 LOC_Os01g58610 LOC_Os01g70990 LOC_Os03g03710 More..
Downstream Genes	LOC_Os06g21380 LOC_Os09g36450 LOC_Os04g42930 LOC_Os10g08550 LOC_Os06g12030 LOC_Os12g13824 LOC_Os08g45140 LOC_Os06g45710 LOC_Os06g04510 LOC_Os08g39600 LOC_Os12g35340 More..

Pathways
KEGG Pathways	rn00010 rn00260 rn00680 rn01100 rn01110 rn01120
Metacyc Pathways	P124-PWY ANAEROFRUCAT-PWY GLUCONEO-PWY PWY-1042 PWY-3801 GLYCOLYSIS PWY-2221 PWY-1622 PWY-6142 PWY-5484 ANAGLYCOLYSIS-PWY P341-PWY P122-PWY PWY-5723

Database Links
Gramene	LOC_Os03g21260.1
Rice Genome Annotation	LOC_Os03g21260.1
Ricechip	LOC_Os03g21260.1
KEGG	osa:4332728 dosa:Os03t0330200-00
Entrez-Gene	4332728