RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g21530.1 View Network Show in Genome Browser |
| Other Names | Os03g0333100 |
| Description | AARP2CN domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12297075-12307635 Nucleotide Length: 3543 |
| Protein-coding | LOC_Os03g21530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19960 LOC_Os02g50370 LOC_Os01g66520 LOC_Os01g08770 LOC_Os02g54110 LOC_Os02g57590 LOC_Os03g05720 LOC_Os01g40250 LOC_Os02g18830 LOC_Os01g13730 LOC_Os01g34200 More.. |
| Downstream Genes | LOC_Os07g25440 LOC_Os12g07300 LOC_Os03g61790 LOC_Os09g18320 LOC_Os04g46310 LOC_Os05g44320 LOC_Os07g10350 LOC_Os03g40110 LOC_Os06g03780 LOC_Os03g22880 LOC_Os04g50660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g21530.1 |
| Rice Genome Annotation | LOC_Os03g21530.1 |
| Ricechip | LOC_Os03g21530.1 |
| KEGG | osa:4332742 dosa:Os03t0333100-01 |
| Entrez-Gene | 4332742 |