RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g21540.1 View Network Show in Genome Browser
Other Names	Os03g0333200
Description	TKL_IRAK_CrRLK1L-1.8 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 12308606-12311869 Nucleotide Length: 2682
Protein-coding	LOC_Os03g21540

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009856	pollination	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005618	cell wall	Cellular Component	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g05630 LOC_Os02g15594 LOC_Os02g55560 LOC_Os02g16660 LOC_Os03g18150 LOC_Os03g07300 LOC_Os02g35910 LOC_Os03g18820 LOC_Os02g08364 LOC_Os02g12600 LOC_Os01g49330 More..
Downstream Genes	LOC_Os06g48300 LOC_Os06g33549 LOC_Os04g56450 LOC_Os04g37904 LOC_Os07g32380 LOC_Os06g44210 LOC_Os06g33530 LOC_Os04g52000 LOC_Os04g31270 LOC_Os10g39540 LOC_Os05g50970 More..

miRNA Regulations
miRNAs	osa-miR2919

Database Links
Gramene	LOC_Os03g21540.1
Rice Genome Annotation	LOC_Os03g21540.1
Ricechip	LOC_Os03g21540.1
KEGG	osa:4332743 dosa:Os03t0333200-01
Entrez-Gene	4332743