RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g21550.2 View Network Show in Genome Browser |
| Other Names | Os03g0333300 |
| Description | eukaryotic translation initiation factor 2 subunit beta, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12315704-12320727 Nucleotide Length: 813 |
| Protein-coding | LOC_Os03g21550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18510 LOC_Os02g56740 LOC_Os01g04730 LOC_Os03g08440 LOC_Os03g18570 LOC_Os03g18580 LOC_Os01g03070 LOC_Os02g13530 LOC_Os02g14059 LOC_Os01g10820 LOC_Os01g52490 More.. |
| Downstream Genes | LOC_Os12g41400 LOC_Os12g07740 LOC_Os12g31380 LOC_Os10g25320 LOC_Os03g44310 LOC_Os06g48350 LOC_Os07g49220 LOC_Os09g15770 LOC_Os12g05430 LOC_Os12g42260 LOC_Os03g21940 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g21550.2 |
| Rice Genome Annotation | LOC_Os03g21550.2 |
| Ricechip | LOC_Os03g21550.2 |
| KEGG | osa:4332744 dosa:Os03t0333300-01 |
| Entrez-Gene | 4332744 |