RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g21680.3 View Network Show in Genome Browser |
| Other Names | Os03g0334700 |
| Description | phospholipid-transporting ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12374208-12380282 Nucleotide Length: 3909 |
| Protein-coding | LOC_Os03g21680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54670 LOC_Os03g18180 |
| Downstream Genes | LOC_Os04g58580 LOC_Os08g33830 LOC_Os05g22940 LOC_Os07g48360 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2090 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g21680.3 |
| Rice Genome Annotation | LOC_Os03g21680.3 |
| Ricechip | LOC_Os03g21680.3 |
| KEGG | osa:4332752 dosa:Os03t0334700-01 |
| Entrez-Gene | 4332752 |