RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g21830.1 View Network Show in Genome Browser |
| Other Names | Os03g0336500 |
| Description | appr-1-p processing enzyme family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12478017-12480135 Nucleotide Length: 606 |
| Protein-coding | LOC_Os03g21830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01250 LOC_Os03g07820 LOC_Os02g49800 LOC_Os03g17780 |
| Downstream Genes | LOC_Os03g61950 LOC_Os10g30540 LOC_Os04g44910 LOC_Os04g44900 LOC_Os09g22450 LOC_Os12g03190 LOC_Os10g33420 LOC_Os08g42580 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5155 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g21830.1 |
| Rice Genome Annotation | LOC_Os03g21830.1 |
| Ricechip | LOC_Os03g21830.1 |
| KEGG | osa:4332764 dosa:Os03t0336500-01 |
| Entrez-Gene | 4332764 |