RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g21940.1 View Network Show in Genome Browser |
| Other Names | Os03g0337800 |
| Description | 60S ribosomal protein L19-3, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12542185-12544692 Nucleotide Length: 627 |
| Protein-coding | LOC_Os03g21940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g14059 LOC_Os01g10820 LOC_Os03g04750 LOC_Os01g54870 LOC_Os01g59990 LOC_Os01g61814 LOC_Os01g62350 LOC_Os02g30050 LOC_Os02g27760 LOC_Os01g19840 LOC_Os01g47660 More.. |
| Downstream Genes | LOC_Os03g40180 LOC_Os05g19370 LOC_Os05g11710 LOC_Os06g35730 LOC_Os10g32820 LOC_Os09g08430 LOC_Os04g42380 LOC_Os11g41610 LOC_Os03g56241 LOC_Os05g38520 LOC_Os04g51630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g21940.1 |
| Rice Genome Annotation | LOC_Os03g21940.1 |
| Ricechip | LOC_Os03g21940.1 |
| KEGG | osa:4332773 dosa:Os03t0337800-01 |
| Entrez-Gene | 4332773 |