RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g21950.1 View Network Show in Genome Browser
Other Names	Os03g0337900
Description	fumarate hydratase, mitochondrial precursor, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 12545980-12552198 Nucleotide Length: 1509
Protein-coding	LOC_Os03g21950

Gene Ontology Classification
GO	Name	Type	Code
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009856	pollination	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005739	mitochondrion	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g19280 LOC_Os01g61380 LOC_Os01g46070 LOC_Os03g19930 LOC_Os01g49190 LOC_Os02g37000 LOC_Os02g11050 LOC_Os02g10070 LOC_Os02g43920 LOC_Os02g53770 LOC_Os01g03710 More..
Downstream Genes	LOC_Os08g33720 LOC_Os05g49880 LOC_Os07g04240 LOC_Os05g47980 LOC_Os03g58920 LOC_Os04g43800 LOC_Os07g43700 LOC_Os12g43630 LOC_Os03g56280 LOC_Os11g33240 LOC_Os06g50000 More..

Pathways
KEGG Pathways	rn00020 rn00720 rn01100 rn01110 rn01120 rn00230 rn00250
Metacyc Pathways	TCA ANARESP1-PWY FERMENTATION-PWY P23-PWY P105-PWY DENOVOPURINE2-PWY PWY-841 P121-PWY

Database Links
Gramene	LOC_Os03g21950.1
Rice Genome Annotation	LOC_Os03g21950.1
Ricechip	LOC_Os03g21950.1
KEGG	osa:4332774 dosa:Os03t0337900-01
Entrez-Gene	4332774