RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22160.1 View Network Show in Genome Browser |
| Other Names | Os03g0340900 |
| Description | relA-SpoT like protein RSH1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12695246-12706457 Nucleotide Length: 2679 |
| Protein-coding | LOC_Os03g22160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08260 LOC_Os01g01920 LOC_Os01g14040 LOC_Os03g20460 LOC_Os01g53070 LOC_Os02g53500 LOC_Os01g45390 LOC_Os01g06020 LOC_Os02g48100 LOC_Os02g40010 LOC_Os02g51830 More.. |
| Downstream Genes | LOC_Os08g19850 LOC_Os12g33100 LOC_Os07g43470 LOC_Os05g28940 LOC_Os08g09940 LOC_Os10g34470 LOC_Os03g57870 LOC_Os03g56840 LOC_Os04g48060 LOC_Os12g07720 LOC_Os03g48040 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PPGPPMET-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22160.1 |
| Rice Genome Annotation | LOC_Os03g22160.1 |
| Ricechip | LOC_Os03g22160.1 |
| KEGG | osa:4332791 dosa:Os03t0340900-01 |
| Entrez-Gene | 4332791 |