RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22340.1 View Network Show in Genome Browser |
| Other Names | Os03g0343500 |
| Description | 60S ribosomal protein L22-2, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12798128-12799750 Nucleotide Length: 396 |
| Protein-coding | LOC_Os03g22340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21940 LOC_Os02g48660 LOC_Os01g61814 LOC_Os02g47140 LOC_Os01g10820 LOC_Os02g14059 LOC_Os02g56960 LOC_Os02g02130 LOC_Os03g04590 LOC_Os02g56990 LOC_Os02g40880 More.. |
| Downstream Genes | LOC_Os09g24690 LOC_Os04g50990 LOC_Os08g06040 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 LOC_Os07g26740 LOC_Os03g38260 LOC_Os10g27190 LOC_Os08g33920 LOC_Os07g33860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22340.1 |
| Rice Genome Annotation | LOC_Os03g22340.1 |
| Ricechip | LOC_Os03g22340.1 |
| KEGG | osa:4332802 dosa:Os03t0343500-01 |
| Entrez-Gene | 4332802 |