RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22400.2 View Network Show in Genome Browser |
| Other Names | Os03g0344300 |
| Description | ulp1 protease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12823585-12828278 Nucleotide Length: 1029 |
| Protein-coding | LOC_Os03g22400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68950 LOC_Os01g68940 LOC_Os03g18350 LOC_Os01g14950 LOC_Os02g38250 LOC_Os01g24060 LOC_Os02g06592 |
| Downstream Genes | LOC_Os07g38760 LOC_Os05g28510 LOC_Os05g06350 LOC_Os11g01180 LOC_Os12g01180 LOC_Os03g49420 LOC_Os12g01290 LOC_Os05g11770 LOC_Os12g38110 LOC_Os07g08840 LOC_Os03g58630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22400.2 |
| Rice Genome Annotation | LOC_Os03g22400.2 |
| Ricechip | LOC_Os03g22400.2 |
| KEGG | osa:4332808 dosa:Os03t0344300-01 |
| Entrez-Gene | 4332808 |