RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22460.2 View Network Show in Genome Browser |
| Other Names | Os03g0345200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12869417-12870624 Nucleotide Length: 213 |
| Protein-coding | LOC_Os03g22460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61814 LOC_Os02g48660 LOC_Os02g18550 LOC_Os01g24690 LOC_Os02g47140 LOC_Os02g40880 LOC_Os01g22490 LOC_Os02g30050 LOC_Os02g01332 LOC_Os02g13530 LOC_Os03g14530 More.. |
| Downstream Genes | LOC_Os10g32920 LOC_Os05g06770 LOC_Os05g38520 LOC_Os07g42950 LOC_Os12g38000 LOC_Os04g28180 LOC_Os08g41810 LOC_Os04g50990 LOC_Os08g39500 LOC_Os03g27260 LOC_Os05g37330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22460.2 |
| Rice Genome Annotation | LOC_Os03g22460.2 |
| Ricechip | LOC_Os03g22460.2 |
| KEGG | osa:4332813 dosa:Os03t0345200-01 |
| Entrez-Gene | 4332813 |