RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22570.2 View Network Show in Genome Browser |
| Other Names | Os03g0347200 |
| Description | MIF4G domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 12976131-12988248 Nucleotide Length: 2604 |
| Protein-coding | LOC_Os03g22570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39890 LOC_Os02g04480 LOC_Os02g13990 LOC_Os02g39300 LOC_Os02g37430 LOC_Os02g42040 LOC_Os03g13760 LOC_Os02g01250 LOC_Os02g01740 LOC_Os03g11200 LOC_Os01g73880 More.. |
| Downstream Genes | LOC_Os07g36940 LOC_Os07g33330 LOC_Os05g06350 LOC_Os12g15420 LOC_Os10g02630 LOC_Os05g05450 LOC_Os04g39444 LOC_Os03g63590 LOC_Os03g46770 LOC_Os09g02700 LOC_Os05g30410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22570.2 |
| Rice Genome Annotation | LOC_Os03g22570.2 |
| Ricechip | LOC_Os03g22570.2 |
| KEGG | osa:4332822 dosa:Os03t0347200-01 |
| Entrez-Gene | 4332822 |