RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22770.2 View Network Show in Genome Browser |
| Other Names | Os03g0351100 |
| Description | CCT/B-box zinc finger protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13152960-13155544 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os03g22770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63270 LOC_Os02g47650 LOC_Os02g02890 LOC_Os02g02320 LOC_Os02g44500 LOC_Os03g09930 LOC_Os03g12030 LOC_Os03g10860 LOC_Os01g60230 LOC_Os01g42730 LOC_Os01g48300 More.. |
| Downstream Genes | LOC_Os04g51330 LOC_Os08g29780 LOC_Os07g41600 LOC_Os05g49170 LOC_Os12g02120 LOC_Os11g02180 LOC_Os08g13320 LOC_Os09g29404 LOC_Os03g31490 LOC_Os12g44310 LOC_Os05g45420 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22770.2 |
| Rice Genome Annotation | LOC_Os03g22770.2 |
| Ricechip | LOC_Os03g22770.2 |
| KEGG | osa:4332842 dosa:Os03t0351100-01 |
| Entrez-Gene | 4332842 |