RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22780.1 View Network Show in Genome Browser |
| Other Names | Os03g0351200 |
| Description | DVR, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13155800-13157404 Nucleotide Length: 1218 |
| Protein-coding | LOC_Os03g22780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47610 LOC_Os02g13970 LOC_Os01g02080 LOC_Os03g03360 LOC_Os01g59060 LOC_Os03g15870 LOC_Os02g08380 LOC_Os03g10060 LOC_Os02g38240 LOC_Os03g03020 LOC_Os03g08790 More.. |
| Downstream Genes | LOC_Os06g27770 LOC_Os05g01110 LOC_Os06g21530 LOC_Os08g41990 LOC_Os10g35644 LOC_Os09g15820 LOC_Os09g10760 LOC_Os06g20320 LOC_Os03g52640 LOC_Os09g36130 LOC_Os06g49110 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-2582 |
| Reference | |
|---|---|
| PubMed | 20484022 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22780.1 |
| Rice Genome Annotation | LOC_Os03g22780.1 |
| Ricechip | LOC_Os03g22780.1 |
| KEGG | osa:4332843 dosa:Os03t0351200-00 |
| Entrez-Gene | 4332843 |