RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g22900.1 View Network Show in Genome Browser |
| Other Names | Os03g0352500,Os03g0352450 |
| Description | SNF2 family N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13236683-13247898 Nucleotide Length: 4374 |
| Protein-coding | LOC_Os03g22900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62040 LOC_Os01g73310 LOC_Os01g63940 LOC_Os01g64630 LOC_Os02g39290 LOC_Os01g62840 LOC_Os01g27040 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os03g16150 More.. |
| Downstream Genes | LOC_Os06g08770 LOC_Os07g08170 LOC_Os04g09860 LOC_Os05g01600 LOC_Os11g06390 LOC_Os03g61970 LOC_Os10g36650 LOC_Os05g05230 LOC_Os05g36290 LOC_Os06g49510 LOC_Os05g23950 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2863a |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g22900.1 |
| Rice Genome Annotation | LOC_Os03g22900.1 |
| Ricechip | LOC_Os03g22900.1 |
| KEGG | osa:4332853 dosa:Os03t0352500-01dosa:Os03t0352450-00 |
| Entrez-Gene | 4332853 |