RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g23970.1 View Network Show in Genome Browser |
| Other Names | Os03g0355800 |
| Description | diphthine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13605475-13608086 Nucleotide Length: 825 |
| Protein-coding | LOC_Os03g23970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g44050 LOC_Os01g43020 LOC_Os01g51120 LOC_Os01g69970 LOC_Os01g59140 LOC_Os03g07570 LOC_Os02g19770 LOC_Os01g37980 LOC_Os02g37870 LOC_Os01g33030 LOC_Os01g14830 More.. |
| Downstream Genes | LOC_Os10g27450 LOC_Os11g11050 LOC_Os09g20090 LOC_Os10g37690 LOC_Os12g36950 LOC_Os03g40110 LOC_Os05g35730 LOC_Os03g49210 LOC_Os05g49230 LOC_Os10g32550 LOC_Os10g36760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g23970.1 |
| Rice Genome Annotation | LOC_Os03g23970.1 |
| Ricechip | LOC_Os03g23970.1 |
| KEGG | osa:4332866 dosa:Os03t0355800-01 |
| Entrez-Gene | 4332866 |