RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g23980.1 View Network Show in Genome Browser |
| Other Names | Os03g0355900 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13608896-13612083 Nucleotide Length: 1002 |
| Protein-coding | LOC_Os03g23980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g21420 LOC_Os02g57180 LOC_Os03g18740 LOC_Os02g57990 LOC_Os03g16980 LOC_Os03g17000 LOC_Os03g07140 |
| Downstream Genes | LOC_Os06g44270 LOC_Os06g04620 LOC_Os03g29170 LOC_Os07g49120 LOC_Os04g10010 LOC_Os04g10000 LOC_Os05g51670 LOC_Os06g44260 LOC_Os04g33240 LOC_Os08g28730 LOC_Os09g15420 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g23980.1 |
| Rice Genome Annotation | LOC_Os03g23980.1 |
| Ricechip | LOC_Os03g23980.1 |
| KEGG | osa:4332867 dosa:Os03t0355900-00 |
| Entrez-Gene | 4332867 |